CDS

Accession Number TCMCG023C19419
gbkey CDS
Protein Id PIN07797.1
Location complement(join(10212..10319,10401..10484,10678..10908,11005..11160,11280..11376,11613..11789,11915..12273,12677..12775,13204..13387,13454..13599,13877..13937,14581..15196,16126..16276,16396..16470,16616..16769,16906..17006,17146..17229,17456..17604,17693..17861,18320..18421,18506..18580,18676..18756,18940..19046,19418..19483,19638..19783,20282..20416,20536..20672,21488..21562,21683..21868,22454..22576,22663..22776,23049..23141,23507..23578,23669..23791,23883..24001,24509..24608,25309..25482,25665..25808,26123..26334,26731..26893))
Organism Handroanthus impetiginosus
locus_tag CDL12_19616

Protein

Length 1915aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA324125, BioSample:SAMN05195323
db_source NKXS01003984.1
Definition rRNA processing protein Rrp5 [Handroanthus impetiginosus]
Locus_tag CDL12_19616

EGGNOG-MAPPER Annotation

COG_category A
Description Suppressor of forked protein (Suf)
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
KEGG_ko ko:K14792        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000460        [VIEW IN EMBL-EBI]
GO:0000462        [VIEW IN EMBL-EBI]
GO:0000466        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006364        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008134        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009553        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016072        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0030490        [VIEW IN EMBL-EBI]
GO:0030684        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032040        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0042254        [VIEW IN EMBL-EBI]
GO:0042274        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048229        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCACCGCCTTCAAAGAAATCTAAATCGAAACCAAACTTGAAATACCTTCAACGGTCACCCAAGAAACGTGCTAAATCCAAAGAAAGCCACCCCTACGGCGCCGTTTCGTCGTTGAAATTGCCTCTTCAGGTGGAAGACGATGTTCCCGACTTCCCCCGAGGTGGGGGGAGTTTGTTAAGTAGAGAAGAGAGAAATGAAGTAATGGCTGTAGCAGACAAGGGGTTTGAGGCAGACCAGAGAGTGTTGAAGAAAAGAAAGAAAGAAAAGAGGGTGCAAAACCGGAATCAGTCTGCAGAGGATGATTTGGGTTCGCTCTTTGGGGATGGAACTATGGGGAAATTGCCAAGGTTTGCAAATAAGATCACTCTAACGAATGTTTCATCGGGGATGAAGCTATGGGGTGTCATTGCTGAAGTCAATGAGAAAGATATTGTGGTTAGTCTTCCCGGAGGATTAAGGGGACTAGTTCGTGCATGTGACGCATTTGATCCTATTTTGGATGATGAAGTAAAAGGGGATGTGGAGAGTAGCTACCTTTCCAGAATATATCATGAAGGGCAGCTTGTCTCTTGCGTTGTGTTGCAAGTTGATGATGATAGAAAAGAAATAGCAAAAAGAAAGATCTGGCTTTCTCTCCGCCTGTCTTTATTACACAAGAGCTTGACACTTGATACTATTCAAGAAGGAATGGTGCTAAGTGCGTATGTAAAAAGCATTGAGGATCATGGTTTTATGCTTCATTTTGGATTACCTTCCTTTGCGGGATTTATGCAGAAACAAAAGCAATCTGATAGCAGAAACCTTGAAATAAGCATAGGCCAGCTTTTACAAGGGGTTGTTAAAAGTGTAGACAGAGCTCGGAAGGTTGTCCATTTGAGTTCTGATGCTGACGTGGTTTCAAAATGTGTGATCAAAGACCTTAAGGGTATTTCAATCGATCTTCTCGTTCCAGGCATGATGGTTAATGCTCGTGTGCAGGCAACCCTTGAAAATGGCATCATGTTATCTTTCCTTTCATATTTTACTGGAACTGTTGACATTTTTAATCTAGACAAAACTTTTCCCCCTTCAAACTGGAAGAATGATTACACAAAAAATCTGAAGTTTAATGCGCGGATCTTGTTTATTGATCCTTCAACTAGGGCTGTTGGACTAACACTGAATCCTTACCTAGTCAGTAATAAGGCTCCATTGTCTATTGTTAAAATTGGGGACATCTTTGATCAGTCTAAAGTAGTCAGGGTTGATAAGGGATCAGGCCTTCTTCTGGAACTTCCTACTCTACCAGTCCCGACCCCAGCTTATGTCAATTTAGCTGATGTGGCTGACAAAGAAGTTGGAAAACTGGAGAAGAGTTTCAAGGAAGGGAGCCTTGTTCGTGTCAGGGTACTTGGGTACAGGCACTTGGAAGGGCTCGCAACTGGCGTTTTAAAGACTAGTGCGTTTGAAGGCTTAGTTTTTACTCACTCTGACGTAAAGCCGGGAATGGTGGTAAAAGCTAAAGTCATTGCAGTTGACAGCTTTGGGGCTATTGTGCAGTTTGCTAGTGGTGTGAAAGCCCTATGTCCTCTCCGTCATATGTCAGAATTTGAAATAGCGAAGCCTAGGAAAAAGTTTCAGGTTGGAGTTGAGTTAGTATTCCGTGTTCTTGGCTGCAAATCCAAGAGAATCACCGTGACACACAAGAAAACTCTTGTTAAGTCAAAGCTGGAGATTCTTAGTTCTTATGCTGATGCCACTGATGGGTTAATCACTCATGGGTGGATTACAAAGATTGAGAAACATGGATGCTTTGTTCGGTTCTACAATGGGGTTCAAGGATTTGCCCCGAGATCTGAACTTGGTTTGGGACCAGGTAGTGACATAGGTTCCATGTATCATGTTGAACAAGTTGTCAAGTGTAGAGTTTTTAAATGTATTCCTGCTTCGCACCGGATATACCTGAGTTTCAACATGACACCTACAAGGATGTCAGAGGATGAGAGACTCAAACCAGGCAGCCTAGTGTCTGGAATTGTTGAGCGTGTAACACCTCAGGCAGTGGTGGTGGACGTCAATGCCTCCAGTCACATGAAAGGCACAATATCTCTTGAACACTTGGCTGACCACCATGGTCTTGCTGCTTCACTGATGTCTGCCATCAAGCCGGGATATCACTTTGATCAACTATTGGTTCTTGATGTTGAGGGAAACAATCTTGTGCTTACTGCCAAGTATTCATTAGTTAACTCAAGCCAACAGCTTCCTCATGATGTTAGCCAAATCCATTCTCACTCTGTAGTGCATGGTTACATATGTAATATAATTGAAAGTGGCTGCTTTGTTCGATTTCTTGGACGTTTAACTGGTTTTGCTCCCAAAAGCAAGGCTATTGATGATAGAAGATCAGATCTTTCAGAGGTCTTTTATGTTGGGCAGTCTGTTCGCAGCAACATACTTGATGTTAGTAGTGACATGCGTAGAATAACACTATCTTTGAAGCAGTCATTGTGCTGTTCAACTGATGCATCTTTTATCCAAGAATACTTTCTTTTGGAAGAGAAGATTGCAAAGCTGCAAGCATTGGACTCTGGAGACCCTGGATTGAGATGGGTTGATGGATTTGGTATTTGCAGTATTGTTGAAGGAAAAGTACATGAAATTAAGGATTTTGGTGTTGCTGTCAGCTTTGAGAAATACAATGATGTGTATGGCTTCATCTCACATTGTCAGTTGGCTGAAACCACCTTGGAGAACAATTCTGTTATCAGAGCTGCAGTTCTTGATGTTTCAAGAATTGAACGCCTTATTGATCTATCTTTAAAGCCGGTGTTCATAAAAAGAGCAAAAGAAGATAACTCGACCATGCAATCTCTTAAGAAGAAACGAAAAAGGGAAGCCCAGAGGGACTTGGAAGTGAATCAAATAGTAGATGCAATAGTTGAGATTGTGAAGGAAAATTACTTGGTTGTTTCGCTTCCAACCTATAACTTTACCATAGGCTATGCGTCATTAGCTGATTACAACACTCAGAAATTACCTCCTAAACATTTTACCAATGGACAAAGTGTCTCTGCCACCGTGATGGCTCTTCCAGGTCCTGCAACGGGTGGGAGATTGCTGTTACTGCTCAAATCATTAAGCGATGGTTTGGAGACATCGAGTTCTAAGCGAGCAAAGAGGAAGTCTGGCTATGATGTTGGATCTCTCATTGAAGCAGAGATTACTGAAATAAAGCCTCTTGAACTGAGAGTGAAATTTGGTTCTGGATTCCATGGGAGGATTCATGTCACTGAGGCAACTGATGATAATTCTGTTGAAAGTCCCTTTAGTAACTACAGAATTGGGCAAACACTTACAGCGAGGATTGTTTCAAAGGGTAACAAGCCAGAAAATGTTAGAGGAATTTATGGATGGGAATTATCTATCAAACCTTCCCTTCTTAGAGGATCGAATGAGATACATGAAATGTTATCTTCTGAAGAGTTCAACTATTCATACGGACAACAGGTTTCCGGGTTTGTGTATAAGATTGACTCTGACTGGGCCTGGCTGACTGTATCGCGAAATGTGAAGGCTCGGTTGTATGTTCTCGACTCTTCATGTGAGCCTTCTGAACTTACAGAATTCCAGAAGCGGTTTTATGTTGGCAAAGCTCTTTCAGGTTACATAATTAGTGCGAATAAGGAGAAGAAGTTACTACGTCTGGTCTTGCATGAACTAGCTGTTGGTGTTGCGGAACTCAGTGAAAATGATCCTGACCATCGTTTATGCCATCTAGCCGAAGGTAGTCTTGTAGGTGGCAGGATTTCTAAGATTCTTCCAGGTGTCGGTGGGTTGCTGGTACAAGTGGATCAGCACCATTATGGGAAGGTTCATTTTACTGACATAACAAACTCATGGGTCTCCAACCCACTTTCTGGTTATCACGAAGGACAGTTCGTTAAATGTAAAGTTCTGGAAATTGATCGTGCTGTTAAGGGCACAGTCCATGTTGACTTATCACTGCGATCAGCTCCAGATGCTTCACGTGACATGGGATCCACTGAGCTTAATGCTGGCATGGATACTTCTGGCCAGCATGTGGACAAAATAACAGATCTTCATCCTAATATGGTTGTACAGGGCTATGTAAAAAATGTTTCCTCGAGAGGATGTTTCATTATGCTTTCTAGGAAGATAGATGCCAAAATTCTTCTTTCTAATTTGTCGGATAATTTTGTTGAAAATCCAGAAAAAGAGTTCCCTGTTGGGAAACTCGTCACTGGCAAGGTGCTATCGGTGGAACCATTGTCTAAGCGGGTTGAAGTTAGTCTTAAGACTTCAGGTGAAAGCAGTGCACCAAAGTCGGAAACTAATCCCTTAAACCATATTACTGTCGGAGATGTTGTTTCTGGAAGAATTAAGCGCATCGAGTCTTATGGCTTGTTTATATCCATTGGTCACACAAATGTCGTGGGCTTGTGCCATGTTTCAGAGCTTGCTGATGATCGTGTAGATGACCTGGAGACAAAGTTTAAAACCGGAGAGAAAGTGACAGTCAAAGTTTTGAAGGTGGATAAAGACAGAAATCGAGTTTCTCTTGGGATGAAGAGTTCCTATTTCAATGATGAGGAAGTATCACCGACACCTCCCAGACAAAGCCATGATATTGCCATTGGCACCAATGATCCTGTCAAATTAGCCGAGCCAACTATTGAAAACACAAGTAATGAATGCGACAGTGGTCATGATCTTATACTAGCAGATGCTGAATCTAGAGCTCTCGTGCCACCCCTCGAGGTTCCTCTAGATGACATAGAAAGCTTAGATATTGAAGGTGGTGCTGGTCAATGTGAAGTAAATGTTACAACTGGGGATACCATTGAAGGGAAAGACCAAAGGAGGGCTAAAAAGAAAGCTAGGGAAGAGAGGGAACGAGAGATAAGGGCTGCTGAGGAGAGGCTGCTGGAGAAAGACATCCCAAGGAATGCTGATGAATTTGAGAAACTTATTCGAAGTTCCCCAAATAGCAGCTTCATATGGATAAAGTACATGGCTTTTATGCTCTCTATGGCTGATATTGAGAAGGCACGATCCATTGCAGAAAGGGCTTTAAGAACAATAAATATTCGAGAAGAGTCTGAGAAGCTGAATATCTGGGTTGCTTATTTCAACTTGGAAAATGAGTATGGCAATCCCCCTGAGGAGGCTGTTACAAAAATATTTCAAAGAGCATTGCAGTATTGTGATCCCAAAAAGGTGCATCTTGCCCTTCTGGGAATGTACGAAAGAACGGAGCAACATAAATTGGCTGATGAGCTTCTCGACAAAATGACTAGAAAGTTCAAGCATTCGTGCCAGGTCTGGTTGAGAAAAATCCAGTCTCTTTTGAAACGAAACAGTGATGGAATTCAGTCGGTTGTAAATCGTGCCCTTCTGAGCCTTCCTCGACATAAGCATATAAAATTTATATCACAGACTGCCATCCTTGAGTTCAAGTGTGGAATTCCAGATAGGGGAAGATCAATGTTTGAGGGAATGCTGAGGGAGTATCCGAAGAGGACAGATTTGTGGAGCGTCTATCTGGATCAAGAGATCCGGCTTGGCGATGCGGATTTGATTCGTGCATTATTTGAGAGAGCAATAAGCCTGAGCCTGCCCCCAAAAAAGATGAAGTTCTTGTTTAAGAAGTACCTCGAGTACGAAAAGTCCATTGGTGATGAAGAACGAATTGAGTCCGTGAAGAAGAAGGCAATGGAATATGTTGAGAATACCCTTGCTTGA
Protein:  
MAPPSKKSKSKPNLKYLQRSPKKRAKSKESHPYGAVSSLKLPLQVEDDVPDFPRGGGSLLSREERNEVMAVADKGFEADQRVLKKRKKEKRVQNRNQSAEDDLGSLFGDGTMGKLPRFANKITLTNVSSGMKLWGVIAEVNEKDIVVSLPGGLRGLVRACDAFDPILDDEVKGDVESSYLSRIYHEGQLVSCVVLQVDDDRKEIAKRKIWLSLRLSLLHKSLTLDTIQEGMVLSAYVKSIEDHGFMLHFGLPSFAGFMQKQKQSDSRNLEISIGQLLQGVVKSVDRARKVVHLSSDADVVSKCVIKDLKGISIDLLVPGMMVNARVQATLENGIMLSFLSYFTGTVDIFNLDKTFPPSNWKNDYTKNLKFNARILFIDPSTRAVGLTLNPYLVSNKAPLSIVKIGDIFDQSKVVRVDKGSGLLLELPTLPVPTPAYVNLADVADKEVGKLEKSFKEGSLVRVRVLGYRHLEGLATGVLKTSAFEGLVFTHSDVKPGMVVKAKVIAVDSFGAIVQFASGVKALCPLRHMSEFEIAKPRKKFQVGVELVFRVLGCKSKRITVTHKKTLVKSKLEILSSYADATDGLITHGWITKIEKHGCFVRFYNGVQGFAPRSELGLGPGSDIGSMYHVEQVVKCRVFKCIPASHRIYLSFNMTPTRMSEDERLKPGSLVSGIVERVTPQAVVVDVNASSHMKGTISLEHLADHHGLAASLMSAIKPGYHFDQLLVLDVEGNNLVLTAKYSLVNSSQQLPHDVSQIHSHSVVHGYICNIIESGCFVRFLGRLTGFAPKSKAIDDRRSDLSEVFYVGQSVRSNILDVSSDMRRITLSLKQSLCCSTDASFIQEYFLLEEKIAKLQALDSGDPGLRWVDGFGICSIVEGKVHEIKDFGVAVSFEKYNDVYGFISHCQLAETTLENNSVIRAAVLDVSRIERLIDLSLKPVFIKRAKEDNSTMQSLKKKRKREAQRDLEVNQIVDAIVEIVKENYLVVSLPTYNFTIGYASLADYNTQKLPPKHFTNGQSVSATVMALPGPATGGRLLLLLKSLSDGLETSSSKRAKRKSGYDVGSLIEAEITEIKPLELRVKFGSGFHGRIHVTEATDDNSVESPFSNYRIGQTLTARIVSKGNKPENVRGIYGWELSIKPSLLRGSNEIHEMLSSEEFNYSYGQQVSGFVYKIDSDWAWLTVSRNVKARLYVLDSSCEPSELTEFQKRFYVGKALSGYIISANKEKKLLRLVLHELAVGVAELSENDPDHRLCHLAEGSLVGGRISKILPGVGGLLVQVDQHHYGKVHFTDITNSWVSNPLSGYHEGQFVKCKVLEIDRAVKGTVHVDLSLRSAPDASRDMGSTELNAGMDTSGQHVDKITDLHPNMVVQGYVKNVSSRGCFIMLSRKIDAKILLSNLSDNFVENPEKEFPVGKLVTGKVLSVEPLSKRVEVSLKTSGESSAPKSETNPLNHITVGDVVSGRIKRIESYGLFISIGHTNVVGLCHVSELADDRVDDLETKFKTGEKVTVKVLKVDKDRNRVSLGMKSSYFNDEEVSPTPPRQSHDIAIGTNDPVKLAEPTIENTSNECDSGHDLILADAESRALVPPLEVPLDDIESLDIEGGAGQCEVNVTTGDTIEGKDQRRAKKKAREEREREIRAAEERLLEKDIPRNADEFEKLIRSSPNSSFIWIKYMAFMLSMADIEKARSIAERALRTINIREESEKLNIWVAYFNLENEYGNPPEEAVTKIFQRALQYCDPKKVHLALLGMYERTEQHKLADELLDKMTRKFKHSCQVWLRKIQSLLKRNSDGIQSVVNRALLSLPRHKHIKFISQTAILEFKCGIPDRGRSMFEGMLREYPKRTDLWSVYLDQEIRLGDADLIRALFERAISLSLPPKKMKFLFKKYLEYEKSIGDEERIESVKKKAMEYVENTLA